Welcome and Course Overview

9:00 AM - 9:30 AM

Illumina Sequencing workflow

Introducing the key terms in Illumina sequencing and how they apply to the workflow

9:30 AM - 10:00AM

Break

10:00 AM - 10:15 AM

Overview of Main Sequencing Applications

Overview of Sequencing in Microbiology Workflows

10:15 AM - 11:15 AM

Break

11:15 AM - 11:30

Library Preparation

Learn about the many ways you can prepare a library from a wide range of DNA sample types.

11:15 AM- 12:30 PM

Library Prep Selector

Break-our activity to help guide your decision making for library preparation

12:30 - 1:00

Lunch

1:00 PM - 2:00 PM

Experimental Design

Learn about considerations such as lab set up, sample type, sequencing depth and more.

2:00 PM - 3:00 PM

Introduction to Illumina Sequencing

Learn about the many Illumina sequencers, how they have advanced and determine which one would be best for your sequencing application.

3:15 PM - 4:15 PM

Review of Day 1

9:00 AM - 9:15 AM

Introduction to Data analysis

Secondary analysis workflow when handle sequencing data from microbes

9:30 AM - 11:00 PM

Break

11:30 PM - 12:00 PM

On-Cloud Data Analysis Activity

Review sequencing data on the cloud and see how to navigate the metrics

12:00 PM- 12:30 PM

Wrap up and summary

12:30 PM- 1:00 PM